bigdatagenomics / adam / 2011
82%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 150
Run time 1min
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2011

Pull #1529

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/267f5f807f90e20863636568f4b7f4cc09b302f7">267f5f807<a href="https://github.com/bigdatagenomics/adam/commit/267f5f807f90e20863636568f4b7f4cc09b302f7">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/3197212c6bdd547c6fd41ee4be5756b732c5fca2">3197212c6</a>">3197212c6</a><a href="https://github.com/bigdatagenomics/adam/commit/267f5f807f90e20863636568f4b7f4cc09b302f7"> into 18191f95f">18191f95f</a>
Pull Request #1529: [ADAM-1169] Write GFF header line pragma in single file mode.

7 of 7 new or added lines in 1 file covered. (100.0%)

5128 of 6259 relevant lines covered (81.93%)

6.54 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
87.5
 -6.25% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformFeatures.scala
1
92.23
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.73
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
61.25
 -1.25% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
96.23
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
87.38
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
1
91.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
90.1
 2.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
70.0
 -0.5% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
2
75.93
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
73.33
 -13.33% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
81.65
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
93.02
 -3.49% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
3
93.26
 -3.37% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
4
62.34
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
5
78.3
 -0.25% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2011.1 252
81.74
2 2011.2 252
81.75
3 2011.3 252
81.75
4 2011.4 252
81.87
5 2011.5 252
81.74
6 2011.6 252
81.87
7 2011.7 252
81.85
8 2011.8 252
81.85
Source Files on build 2011
Coverage ∆ File Lines Relevant Covered Missed Hits/Line