bigdatagenomics / adam / 2670

DEFAULT BRANCH: master
Ran
Jobs 8
Files 149
Run time 1min
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2670

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jenkins

heuermh 
[ADAM-1462] Add quality score binner.

Resolves #1462. Adds an API for binning quality scores to `AlignmentRecordRDD`
and `FragmentRDD`. Exposes this on the `Transform` CLI.

58 of 58 new or added lines in 4 files covered. (100.0%)

5121 of 6244 relevant lines covered (82.01%)

6.55 hits per line

Coverage Regressions

Lines Coverage ∆ File
67
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
42
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2670.1 0
81.85
2 2670.2 0
81.85
3 2670.3 0
81.85
4 2670.4 0
81.87
5 2670.5 0
81.87
6 2670.6 0
81.87
7 2670.7 0
81.85
8 2670.8 0
81.87
Source Files on build 2670
Detailed source file information is not available for this build.