bigdatagenomics / adam / 1997
82%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 149
Run time 2min
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
1997

Pull #1524

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/4aa01349a7881ae73d9c5f5c0d8e533899d027de">4aa01349a<a href="https://github.com/bigdatagenomics/adam/commit/4aa01349a7881ae73d9c5f5c0d8e533899d027de">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/cedb700f096d2b5ebe3b097def8fa3810a63e51d">cedb700f0</a>">cedb700f0</a><a href="https://github.com/bigdatagenomics/adam/commit/4aa01349a7881ae73d9c5f5c0d8e533899d027de"> into 18191f95f">18191f95f</a>
Pull Request #1524: [ADAM-1499] Enable reuse of broadcasted objects in region join.

42 of 42 new or added lines in 2 files covered. (100.0%)

5129 of 6271 relevant lines covered (81.79%)

6.53 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
3
53.85
 5.2% adam-core/src/main/scala/org/bdgenomics/adam/rdd/TreeRegionJoin.scala
17
67.56
 -2.94% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
95.45
 -1.52% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
96.63
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
93.75
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
88.12
 0.99% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
89.73
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
82.19
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/util/FileExtensions.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
87.5
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
95.35
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
65.38
 1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
91.26
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
2
85.02
 -0.31% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
70.37
 -5.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
4
78.8
 0.25% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
6
67.56
 -2.94% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
6
58.44
 -6.49% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
Jobs
ID Job ID Ran Files Coverage
1 1997.1 250
81.68
2 1997.2 250
81.68
3 1997.3 250
81.58
4 1997.4 250
81.69
5 1997.5 250
81.6
6 1997.6 250
81.69
7 1997.7 250
81.6
8 1997.8 250
81.58
Source Files on build 1997
Coverage ∆ File Lines Relevant Covered Missed Hits/Line