bigdatagenomics / adam / 1987
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 150
Run time 50s
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1987

Pull #1391

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/f02af2af08fa4462f13edd7adf415ae11ed751fd">f02af2af0<a href="https://github.com/bigdatagenomics/adam/commit/f02af2af08fa4462f13edd7adf415ae11ed751fd">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/92db52ae4b9415938f47fa8f5a387a2c4620ba5c">92db52ae4</a>">92db52ae4</a><a href="https://github.com/bigdatagenomics/adam/commit/f02af2af08fa4462f13edd7adf415ae11ed751fd"> into 0dd09b258">0dd09b258</a>
Pull Request #1391: [ADAM-1018] Add support for Spark SQL Datasets.

321 of 321 new or added lines in 12 files covered. (100.0%)

5209 of 6927 relevant lines covered (75.2%)

3.01 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
69.65
 -0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
2
78.11
 -1.19% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
81.82
 -2.39% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
3
76.19
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
4
64.86
 -6.78% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
6
74.14
 -10.18% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
6
76.98
 -5.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
11
46.15
 -6.02% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
14
82.22
 -0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
91
0.0
 adam-codegen/src/main/scala/org/bdgenomics/adam/codegen/DumpSchemasToProduct.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
54.49
 -0.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
1
63.64
 -3.03% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
92.31
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/Coverage.scala
1
89.73
 -0.68% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
61.25
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
64.29
 -7.14% adam-core/src/main/scala/org/bdgenomics/adam/projections/Projection.scala
1
97.78
 -1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
91.26
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
99.22
 0.04% adam-core/src/main/scala/org/bdgenomics/adam/serialization/ADAMKryoRegistrator.scala
2
96.97
 -1.52% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
2
88.12
 -0.99% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
91.67
 -8.33% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
73.33
 -13.33% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
2
63.64
 2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
81.82
 -2.39% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
2
75.93
 1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
76.19
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
3
85.17
 -0.15% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
46.15
 -6.02% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
5
82.57
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
8
74.14
 -10.18% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
10
82.22
 -0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
22
64.86
 -6.78% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
47
69.65
 -0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
53
76.98
 -5.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
84
78.11
 -1.19% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1987.1 262
75.18
2 1987.2 262
75.18
3 1987.3 262
75.2
4 1987.4 262
75.2
Source Files on build 1987
Coverage ∆ File Lines Relevant Covered Missed Hits/Line