bigdatagenomics / adam / 1984
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 150
Run time 1min
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1984

Pull #1391

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/312c057581461d455ccca66b4a1f00c7dfb01746">312c05758<a href="https://github.com/bigdatagenomics/adam/commit/312c057581461d455ccca66b4a1f00c7dfb01746">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/133fcca0ffb3f228a56ad16c56e9c5453e2c661d">133fcca0f</a>">133fcca0f</a><a href="https://github.com/bigdatagenomics/adam/commit/312c057581461d455ccca66b4a1f00c7dfb01746"> into ea9ce6c9a">ea9ce6c9a</a>
Pull Request #1391: [ADAM-1018] Add support for Spark SQL Datasets.

295 of 295 new or added lines in 12 files covered. (100.0%)

5145 of 7022 relevant lines covered (73.27%)

5.85 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
89.13
 -2.17% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
2
78.18
 -6.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
2
81.82
 -2.39% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
3
78.8
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
3
76.19
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
4
64.86
 -6.78% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
10
75.38
 -6.47% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
11
46.15
 -6.02% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
14
82.22
 -0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
90
0.0
 adam-codegen/src/main/scala/org/bdgenomics/adam/codegen/DumpSchemasToProduct.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
62.5
 1.25% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
64.94
 3.9% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
88.35
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
1
99.19
 0.01% adam-core/src/main/scala/org/bdgenomics/adam/serialization/ADAMKryoRegistrator.scala
1
91.67
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
92.31
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/Coverage.scala
1
95.51
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
91.26
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
54.49
 -0.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
2
85.02
 -0.15% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
90.1
 -1.98% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
76.19
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
2
81.82
 -2.39% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
2
74.07
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
82.57
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
46.15
 -6.02% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
10
78.18
 -6.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
10
82.22
 -0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
22
64.86
 -6.78% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
50
68.69
 -1.87% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
53
75.38
 -6.47% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
78
78.8
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 1984.1 261
73.2
2 1984.2 261
73.2
3 1984.3 261
73.18
4 1984.4 261
73.18
5 1984.5 261
73.16
6 1984.6 261
73.14
7 1984.7 261
73.16
8 1984.8 261
73.14
Source Files on build 1984
Coverage ∆ File Lines Relevant Covered Missed Hits/Line