569
83%

Ran 04 May 2017 04:58AM UTC

Jobs 4

Files 41

Run time 2min

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Build # 569

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

Develop (#58)

* update timeseries.ipynb

* add test for dendrogram

* add a drop parameter to drop samples with no metadata

* add test for plotting module

* require higher scikit-bio version

* add __getitem__ so can use exp[sampleid,featureid]

* add __getitem__ so can use exp[sampleid,featureid]

* add CALOUR_CONFIG_FILE env. var for config file location

* show warning message if database module not installed

* fix hdf5 biom save to include taxonomy

* fix the json/hdf5 taxonomy incosistancy

* fix the json/hdf5 taxonomy incosistancy

* fix the json/hdf5 taxonomy incosistancy

* add new functions to doc

* fix testing for the new hdf taxonomy save and default to no removing k__

* add moving pic for the manuscript

* minor change on Experiment.__getitem__

Coverage Stats

2948 of 3764 relevant lines covered (78.32%)

3.13 hits per line

Jobs

ID	Job ID	Ran	Coverage
1	569.1 (CONDA_PY=35)	04 May 2017 04:58AM UTC	78.27	Travis Job 569.1
2	569.2 (CONDA_PY=36)	04 May 2017 04:59AM UTC	78.27	Travis Job 569.2
3	569.3 (CONDA_PY=35)	04 May 2017 04:59AM UTC	78.32	Travis Job 569.3
4	569.4 (CONDA_PY=36)	04 May 2017 05:00AM UTC	78.32	Travis Job 569.4

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