bigdatagenomics / adam / 1951
82%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 146
Run time 1min
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1951

Pull #1493

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/850ab5a1619d75185c0b4cb023cc18f89ffe7294">850ab5a16<a href="https://github.com/bigdatagenomics/adam/commit/850ab5a1619d75185c0b4cb023cc18f89ffe7294">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/82c982e61958b73f86f5a61224d8e3e9a21126bf">82c982e61</a>">82c982e61</a><a href="https://github.com/bigdatagenomics/adam/commit/850ab5a1619d75185c0b4cb023cc18f89ffe7294"> into 04444aa22">04444aa22</a>
Pull Request #1493: [ADAM-1483] Remove collapse parameter from AlignmentRecordRDD.toCoverage

15 of 15 new or added lines in 3 files covered. (100.0%)

4936 of 6044 relevant lines covered (81.67%)

6.52 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
84.31
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
5
67.74
 -12.26% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
77.36
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
67.74
 -12.26% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
92.13
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
94.19
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
61.25
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
97.78
 -1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
79.48
 0.78% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
1
84.13
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
87.95
 -1.2% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
90.91
 -1.01% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
2
88.12
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
59.46
 -5.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
2
81.36
 -0.54% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
2
96.23
 -3.77% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
2
62.34
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
79.82
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
4
53.67
 -1.69% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
Jobs
ID Job ID Ran Files Coverage
1 1951.1 246
81.55
2 1951.2 246
81.57
3 1951.3 246
81.57
4 1951.4 246
81.52
5 1951.5 246
81.5
6 1951.6 246
81.5
7 1951.7 246
81.55
8 1951.8 246
81.52
Source Files on build 1951
Coverage ∆ File Lines Relevant Covered Missed Hits/Line