bigdatagenomics / adam / 1936
82%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 146
Run time 1min
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1936

Pull #1479

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/faf90e7c4f61a974860d22079ccd8f37cb5c0cb2">faf90e7c4<a href="https://github.com/bigdatagenomics/adam/commit/faf90e7c4f61a974860d22079ccd8f37cb5c0cb2">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/9f4c33b7b9df9e280da4a16f6e87545db7686725">9f4c33b7b</a>">9f4c33b7b</a><a href="https://github.com/bigdatagenomics/adam/commit/faf90e7c4f61a974860d22079ccd8f37cb5c0cb2"> into 93b32c61c">93b32c61c</a>
Pull Request #1479: [ADAM-1480] Add switch to disable the fast concat method.

42 of 42 new or added lines in 12 files covered. (100.0%)

4952 of 6060 relevant lines covered (81.72%)

6.53 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
3
6.67
 -0.48% adam-cli/src/main/scala/org/bdgenomics/adam/cli/ADAM2Vcf.scala
12
82.58
 -5.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
55.62
 0.25% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
1
74.07
 0.49% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
78.26
 -1.74% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
90.1
 3.96% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
87.5
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
62.5
 1.25% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
69.54
 -0.51% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
80.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
81.62
 -0.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
62.16
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
91.92
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
2
85.32
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
86.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
2
77.89
 0.77% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
81.65
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
63.64
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
Jobs
ID Job ID Ran Files Coverage
1 1936.1 247
81.58
2 1936.2 247
81.58
3 1936.3 247
81.6
4 1936.4 247
81.58
5 1936.5 247
81.57
6 1936.6 247
81.6
7 1936.7 247
81.57
8 1936.8 247
81.58
Source Files on build 1936
Coverage ∆ File Lines Relevant Covered Missed Hits/Line