2545

Ran 27 Mar 2017 11:12PM UTC

Jobs 8

Files 145

Run time 48s

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Build # 2545

Build Type

push

jenkins

Committed by

heuermh

Commit Message

[ADAM-1455] Upgrade to Hadoop-BAM 7.8.0 and htsjdk 2.9.1

Resolves #1455. Adds `org.bdgenomics.adam.rdd.read.RepairPartitions`, which
works around removed functionality from Hadoop-BAM for keeping read pairs from
a queryname sorted BAM file in a single partition.

Run Details

4739 of 5872 relevant lines covered (80.71%)

6.45 hits per line

Jobs

ID	Job ID	Ran	Coverage
1	2545.1	27 Mar 2017 11:12PM UTC	80.57
2	2545.2	27 Mar 2017 11:12PM UTC	80.55
3	2545.3	27 Mar 2017 11:12PM UTC	80.55
4	2545.4	27 Mar 2017 11:12PM UTC	80.57
5	2545.5	27 Mar 2017 11:12PM UTC	80.65
6	2545.6	27 Mar 2017 11:12PM UTC	80.64
7	2545.7	27 Mar 2017 11:12PM UTC	80.64
8	2545.8	27 Mar 2017 11:12PM UTC	80.65

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