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bigdatagenomics / adam / 2545

Build:
DEFAULT BRANCH: master
Ran 27 Mar 2017 11:12PM UTC
Jobs 8
Files 145
Run time 48s
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[ADAM-1455] Upgrade to Hadoop-BAM 7.8.0 and htsjdk 2.9.1

Resolves #1455. Adds `org.bdgenomics.adam.rdd.read.RepairPartitions`, which
works around removed functionality from Hadoop-BAM for keeping read pairs from
a queryname sorted BAM file in a single partition.

4739 of 5872 relevant lines covered (80.71%)

6.45 hits per line

Jobs
ID Job ID Ran Files Coverage
1 2545.1 27 Mar 2017 11:12PM UTC 0
80.57
2 2545.2 27 Mar 2017 11:12PM UTC 0
80.55
3 2545.3 27 Mar 2017 11:12PM UTC 0
80.55
4 2545.4 27 Mar 2017 11:12PM UTC 0
80.57
5 2545.5 27 Mar 2017 11:12PM UTC 0
80.65
6 2545.6 27 Mar 2017 11:12PM UTC 0
80.64
7 2545.7 27 Mar 2017 11:12PM UTC 0
80.64
8 2545.8 27 Mar 2017 11:12PM UTC 0
80.65
Source Files on build 2545
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