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hall-lab / svtools / 420

Builds Branch Commit Type Ran Committer Via Coverage
420 develop Add specification of sex chromosome names Old code assumed X and Y and no chr prefix. This allows for the names to be specified explicitly and defaults to chrX and chrY to match human build 38. Pull #248 09 Mar 2018 04:39AM UTC web-flow travis-ci pending completion   set done
419 sex_chromosomes Add specification of sex chromosome names Old code assumed X and Y and no chr prefix. This allows for the names to be specified explicitly and defaults to chrX and chrY to match human build 38. push 09 Mar 2018 04:38AM UTC ernfrid travis-ci pending completion   set done
418 develop Minor formatting Pull #248 09 Mar 2018 03:51AM UTC web-flow travis-ci pending completion   set done
417 sex_chromosomes Minor formatting push 09 Mar 2018 03:50AM UTC ernfrid travis-ci pending completion   set done
416 develop Add cnvnator exclude files Pull #244 08 Feb 2018 05:48PM UTC web-flow travis-ci pending completion   set done
415 with_exclude_files Add cnvnator exclude files push 08 Feb 2018 05:47PM UTC apregier travis-ci pending completion   set done
414 develop Merge pull request #243 from ernfrid/sane_pr_error_message Sane pr error message push 24 Jan 2018 12:52AM UTC web-flow travis-ci pending completion   set done
413 develop Remove unnecessary import Pull #243 24 Jan 2018 12:44AM UTC web-flow travis-ci pending completion   set done
412 develop Be more helpful when encountering missing probs Provide better user feedback on what has gone wrong and how to fix it if PRPOS or PREND are missing. Pull #243 24 Jan 2018 12:43AM UTC web-flow travis-ci pending completion   set done
411 develop Merge pull request #234 from ernfrid/vcf_harmonize Support 8 column VCFs Fixes #202 Closes #193 Closes #199 push 13 Jan 2018 06:39PM UTC web-flow travis-ci pending completion   set done
410 develop Remove last references to SNAME1 Pull #234 13 Jan 2018 06:30PM UTC web-flow travis-ci pending completion   set done
409 develop Merge branch 'vcf_harmonize' of https://github.com/ernfrid/svtools into vcf_harmonize Pull #234 13 Jan 2018 06:15PM UTC web-flow travis-ci pending completion   set done
408 develop Finishing resolve merge conflict Pull #234 13 Jan 2018 04:48AM UTC web-flow travis-ci pending completion   set done
406 develop Merge pull request #235 from ernfrid/cn_missing Set entire sample to missing CN if cnvnator fails. This happens on a chromosome or sample basis. See abyzovlab/CNVnator#83 Previously we simply died which results in truncated files and head... push 13 Jan 2018 04:25AM UTC web-flow travis-ci pending completion   set done
405 develop Break up long line Pull #235 13 Jan 2018 04:19AM UTC web-flow travis-ci pending completion   set done
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