zhanglab / psamm / 1100

Builds Branch Commit Type Ran Committer Via Coverage
1100 develop Merge pull request #169 from jonls/gapfill-penalty Gapfill penalty push web-flow travis-ci pending completion   set done
1099 develop gapfill: Allow user to specify penalties on command line Pull #169 web-flow travis-ci pending completion   set done
1098 develop gapfill: Allow user to specify penalties on command line Pull #169 web-flow travis-ci pending completion   set done
1097 develop Merge pull request #168 from jonls/gapfill-improve-output gapfill: Improve input parsing and output of result push web-flow travis-ci pending completion   set done
1096 develop gapfill: Improve input parsing and output of result After GapFind, show number of blocked compounds found and show compound IDs along with compound names. If compounds to unblock are specified with --compound but without compartment, assume the d... Pull #168 web-flow travis-ci pending completion   set done
1095 develop Merge pull request #154 from jonls/gapfill-flux-threshold Gapfill flux threshold push web-flow travis-ci pending completion   set done
1094 develop gapfill: Set reasonable intergrality tolerance and warn otherwise With this change, the gapfind/gapfill procedures will change the integrality tolerance to a reasonable value based on v_max and epsilon. If the calculated integrality tolerance is ... Pull #154 web-flow travis-ci pending completion   set done
1093 develop gapfill: Set reasonable intergrality tolerance and warn otherwise With this change, the gapfind/gapfill procedures will change the integrality tolerance to a reasonable value based on v_max and epsilon. If the calculated integrality tolerance is ... Pull #154 web-flow travis-ci pending completion   set done
1092 develop gapfill: Set reasonable intergrality tolerance and warn otherwise With this change, the gapfind/gapfill procedures will change the integrality tolerance to a reasonable value based on v_max and epsilon. If the calculated integrality tolerance is ... Pull #154 web-flow travis-ci pending completion   set done
1091 develop Merge pull request #167 from jonls/lp-tolerances-min-max lp: Allow access to tolerances through property with min/max push web-flow travis-ci pending completion   set done
1090 develop lp: Allow access to tolerances through property with min/max Changes the tolerances on solvers to be exposed through an object that provides access to both the current value and the minimum/maximum values for each tolerance setting. Pull #167 web-flow travis-ci pending completion   set done
1089 develop gapfill: Set reasonable intergrality tolerance and warn otherwise With this change, the gapfind/gapfill procedures will change the integrality tolerance to a reasonable value based on v_max and epsilon. If the calculated integrality tolerance is ... Pull #154 web-flow travis-ci pending completion   set done
1088 develop lp: Allow access to tolerances through property with min/max Changes the tolerances on solvers to be exposed through an object that provides access to both the current value and the minimum/maximum values for each tolerance setting. Pull #167 web-flow travis-ci pending completion   set done
1087 develop lp: Allow access to tolerances through property with min/max Changes the tolerances on solvers to be exposed through an object that provides access to both the current value and the minimum/maximum values for each tolerance setting. Pull #167 web-flow travis-ci pending completion   set done
1086 develop gapfill: Set reasonable intergrality tolerance and warn otherwise With this change, the gapfind/gapfill procedures will change the integrality tolerance to a reasonable value based on v_max and epsilon. If the calculated integrality tolerance is ... Pull #154 web-flow travis-ci pending completion   set done