LoLab-VU / pysb / 520

Builds Branch Commit Type Ran Committer Via Coverage
520 sensitivity_analysis Refine naming of private methods in sensitivity analysis push alubbock travis-ci pending completion   set done
519 master Much faster expression evaluation by pulling lambdify out of loop (#248) * Much faster expression evaluation by pulling lambdify out of loop sympy.lambdify is relatively slow, and was unnecessarily being evaluated for every simulation during ... push jmuhlich travis-ci pending completion   set done
518 sensitivity_analysis Refine naming of private methods in sensitivity analysis push alubbock travis-ci pending completion   set done
517 fast_exprs Merge branch 'master' into fast_exprs push web-flow travis-ci pending completion   set done
516 bngSSASimulator Rebased to master. Corrected example to be ssa simulation. Removed docstring from SimulationResultNF (it was a scipyode example. Need to add nfsim download to test NF simulationresults) push JamesPino travis-ci pending completion   set done
514 fast_exprs Fix sphinx documentation build for pysb.integrate and pysb.simulator push alubbock travis-ci pending completion   set done
513 dev Much faster expression evaluation by pulling lambdify out of loop sympy.lambdify is relatively slow, and was unnecessarily being evaluated for every simulation during SimulationResult construction. I've refactored the SimulationResult constructor... push alubbock travis-ci pending completion   set done
512 fast_exprs Much faster expression evaluation by pulling lambdify out of loop sympy.lambdify is relatively slow, and was unnecessarily being evaluated for every simulation during SimulationResult construction. I've refactored the SimulationResult constructor... push alubbock travis-ci pending completion   set done
511 sensitivity_analysis Sensitivity analysis plot fns now return figure objects push alubbock travis-ci pending completion   set done
495 dev Merge branch 'biomodels' into dev push alubbock travis-ci pending completion   set done
494 dev Merge branch 'sensitivity_analysis' into dev push alubbock travis-ci pending completion   set done
493 sensitivity_analysis Improvements to documentation and final code tweaks push alubbock travis-ci pending completion   set done
490 master Handle unicode Observable and Expression names in python 2 (#245) Due to implementation details in numpy's recarray type, `unicode` objects in Observable and Expression names trigger a numpy exception in the simulator code. This is true even if t... push jmuhlich travis-ci pending completion   set done
489 master cupSODA simulator support (#242) Introduce new "CupSodaSimulator" which wraps the "cupSODA" GPU simulator Highlights: * Introduced pysb.simulator.CupSodaSimulator, following the standard PySB simulator API. No special Python libraries ar... push jmuhlich travis-ci pending completion   set done
488 dev Merge branch 'cupsoda' into dev push alubbock travis-ci pending completion   set done