broadinstitute / cms / 46

Builds Branch Commit Type Ran Committer Via Coverage
46 ct-cms first pass at tped processing handling X chromosome The VCF->TPED processing code now separates out record into files separated by count of genotypes present, to account for sections of haploid, diploid, and mixed regions, as in the case of sampl... push tomkinsc travis-ci pending completion   set done
45 ct-cms Typo fix push tomkinsc travis-ci pending completion   set done
42 master Merge pull request #4 from broadinstitute/ct-cms pull request for merge of ct-cms into master push tomkinsc travis-ci pending completion   set done
43 ct-cms added landscape.io badge to README push tomkinsc travis-ci pending completion   set done
41 master additional landscape.io/pylint-inspired changes also added .landscape.yml config file to ignore old/ directories Pull #4 tomkinsc travis-ci pending completion   set done
40 ct-cms additional landscape.io/pylint-inspired changes also added .landscape.yml config file to ignore old/ directories push tomkinsc travis-ci pending completion   set done
38 ct-cms additional improvements following landscape.io/pylint suggestions push tomkinsc travis-ci pending completion   set done
39 master additional improvements following landscape.io/pylint suggestions Pull #4 tomkinsc travis-ci pending completion   set done
37 master Added Selscan's norm to commandset of scans.py, updated version of selscan from 1.0.5 to 1.0.5a Added Selscan's norm to commandset of scans.py, updated version of selscan from 1.0.5 to 1.0.5a to have latest version of norm Pull #4 tomkinsc travis-ci pending completion   set done
36 ct-cms Added Selscan's norm to commandset of scans.py, updated version of selscan from 1.0.5 to 1.0.5a Added Selscan's norm to commandset of scans.py, updated version of selscan from 1.0.5 to 1.0.5a to have latest version of norm push tomkinsc travis-ci pending completion   set done
35 master landscape.io/lint suggested improvements Pull #4 tomkinsc travis-ci pending completion   set done
34 ct-cms landscape.io/lint suggested improvements push tomkinsc travis-ci pending completion   set done
33 master fixed off-by-one error in tped position string pysam coordinates are zero-based, whereas vcf coordinates are one-based. Pull #4 tomkinsc travis-ci pending completion   set done
32 ct-cms fixed off-by-one error in tped position string pysam coordinates are zero-based, whereas vcf coordinates are one-based. push tomkinsc travis-ci pending completion   set done
31 ct-cms VERSION file is now ignored push tomkinsc travis-ci pending completion   set done