starius / lua-npge / 120

Builds Branch Commit Type Ran Committer Via Coverage
120 master test of BlockSet.fragments applied to bad sequence push starius travis-ci pending completion   set done
119 master fix cpp.BlockSet.blockByFragment(parted fragment) push starius travis-ci pending completion   set done
118 master PangenomeMaker: make sure no overlaps in input push starius travis-ci pending completion   set done
117 master cpp: fix Fragments comparison Consider orientation https://travis-ci.org/starius/lua-npge/builds/50001655 was failed because of fragments of length 1, with same start and stop, but different ori. push starius travis-ci pending completion   set done
115 master fix memory error in model.cpp see https://travis-ci.org/starius/lua-npge/builds/49974852 test Block_spec.lua / block:text(unknown fragment) throws push starius travis-ci pending completion   set done
113 master cpp: implement class Block push starius travis-ci pending completion   set done
112 master cpp: shared pointers keep const values Just to make sure values never change. push starius travis-ci pending completion   set done
111 master use cpp's sequence processors Functions complement, to_atgcn and to_atgcn_and_gap were implemented in C (each function in .so file). They are also implemented in C++ version. C functions were removed. C++ functions are used instead. push starius travis-ci pending completion   set done
110 master cpp: keep Fragment in shared pointer Keeping fragments as values (as originally implemented) is too tricky. Lua version of model is closer to shared pointer valuant. push starius travis-ci pending completion   set done
109 master lua_model/registerType: fix making table weak push starius travis-ci pending completion   set done
108 master Fragment_spec: fix throwing test for parts() This test used to catch another kind of error (trying to construct parted fragment on linear sequences). push starius travis-ci pending completion   set done
107 master Fragment_spec: parts() throws if seq is linear push starius travis-ci pending completion   set done
106 master travis: do not print exitless-busted (fixed) push starius travis-ci pending completion   set done
105 master fix exitless-busted building rule push starius travis-ci pending completion   set done
100 master lua_model: do not use macros for try and catch * confusing for me * confusing for gcov push starius travis-ci pending completion   set done