broadinstitute / gamgee / 637

Builds Branch Commit Type Ran Committer Via Coverage
637 master Variant: rename format and info fields * eliminate is_hom_ref, is_het and is_hom_var from Variant. These should only be used inside the individual's Genotype * rename format_field to individual_field (also get rid of the generic_ prefix) * ren... Pull #150 MauricioCarneiro travis-ci pending completion   set done
636 master Variant: rename format and info fields * eliminate is_hom_ref, is_het and is_hom_var from Variant. These should only be used inside the individual's Genotype * rename format_field to individual_field (also get rid of the generic_ prefix) * ren... Pull #150 MauricioCarneiro travis-ci pending completion   set done
635 mc_rename_info_and_format Variant: rename format and info fields * eliminate is_hom_ref, is_het and is_hom_var from Variant. These should only be used inside the individual's Genotype * rename format_field to individual_field (also get rid of the generic_ prefix) * ren... push MauricioCarneiro travis-ci pending completion   set done
634 mc_rename_info_and_format Variant: rename info_field to shared_field push MauricioCarneiro travis-ci pending completion   set done
633 jt_mvr_optimization VI tmp push jmthibault79 travis-ci pending completion   set done
632 mc_rename_info_and_format Variant: rename format_field to individual_field (also get rid of the generic_ prefix) push MauricioCarneiro travis-ci pending completion   set done
631 mc_rename_info_and_format Variant: eliminate is_hom_ref, is_het and is_hom_var from Variant. These should only be used inside the individual's Genotype push MauricioCarneiro travis-ci pending completion   set done
630 master Merge pull request #149 from broadinstitute/mc_fix_variant_field_iterators VariantField: fix operator[] skip size push MauricioCarneiro travis-ci pending completion   set done
628 mc_fix_variant_field_iterators VariantField: fix operator[] skip size it was skipping the number of samples when it should be skipping the number of **values per sample**. fixes #146 A few updates to the test routine to avoid code duplication and catch this bug should it eve... push MauricioCarneiro travis-ci pending completion   set done
629 master VariantField: fix operator[] skip size it was skipping the number of samples when it should be skipping the number of **values per sample**. fixes #146 A few updates to the test routine to avoid code duplication and catch this bug should it eve... Pull #149 MauricioCarneiro travis-ci pending completion   set done
627 master VariantField: fix operator[] skip size it was skipping the number of samples when it should be skipping the number of **values per sample**. fixes #146 A few updates to the test routine to avoid code duplication and catch this bug should it eve... Pull #149 MauricioCarneiro travis-ci pending completion   set done
626 mc_fix_variant_field_iterators VariantField: fix operator[] skip size it was skipping the number of samples when it should be skipping the number of **values per sample**. fixes #146 A few updates to the test routine to avoid code duplication and catch this bug should it eve... push MauricioCarneiro travis-ci pending completion   set done
625 jt_mvr_optimization move variant push jmthibault79 travis-ci pending completion   set done
624 master Merge pull request #147 from broadinstitute/dr_rename_samtag_is_missing Rename SamTag::is_present() to is_missing() and remove SamTag template specialization in gamgee::is_missing() push MauricioCarneiro travis-ci pending completion   set done
623 master Rename SamTag::is_present() to is_missing() and remove SamTag template specialization in gamgee::is_missing() Pull #147 droazen travis-ci pending completion   set done