broadinstitute / gamgee / 787

Builds Branch Commit Type Ran Committer Via Coverage
787 mc_random_cleanups address pesky reviewer's comments push MauricioCarneiro travis-ci pending completion   set done
786 master Merge pull request #198 from broadinstitute/mc_individual_operator_equals_187 IndividualField: add operator== and operator!= push MauricioCarneiro travis-ci pending completion   set done
782 master Merge pull request #197 from broadinstitute/mc_operator_equals_shared_186 SharedField: add operator== and operator!= push MauricioCarneiro travis-ci pending completion   set done
785 master SamBuilder: make move operations default Pull #201 MauricioCarneiro travis-ci pending completion   set done
783 mc_individual_operator_equals_187 IndividualField: add operator== and operator!= Add implementation of the two operators for both IndividualField and IndividualFieldValue so we can write tests more easily and compare objects. Comparison is based on value equality. The Genotype cl... push MauricioCarneiro travis-ci pending completion   set done
781 master add != tests Pull #198 MauricioCarneiro travis-ci pending completion   set done
781 mc_individual_operator_equals_187 add != tests push MauricioCarneiro travis-ci pending completion   set done
780 master Merge pull request #200 from broadinstitute/mc_interval_support_163 Interval: add interval parsing support push MauricioCarneiro travis-ci pending completion   set done
779 mc_random_cleanups SamBuilder: make move operations default push MauricioCarneiro travis-ci pending completion   set done
778 master Merge pull request #190 from broadinstitute/mc_mate_alignment_stop Sam: implementation of mate operations push MauricioCarneiro travis-ci pending completion   set done
777 master Sam: implementation of mate operations * add mate_alignment_stop, mate_unclipped_start, mate_unclipped_stop * add mate operations overloads for performance and tests * fix off-by-one bug on Sam::alignment_stop (it was reporting the base after the... Pull #190 MauricioCarneiro travis-ci pending completion   set done
776 mc_mate_alignment_stop Sam: implementation of mate operations * add mate_alignment_stop, mate_unclipped_start, mate_unclipped_stop * add mate operations overloads for performance and tests * fix off-by-one bug on Sam::alignment_stop (it was reporting the base after the... push MauricioCarneiro travis-ci pending completion   set done
775 master reviewer's comments on unclipped stuff Pull #190 MauricioCarneiro travis-ci pending completion   set done
772 mc_interval_support_163 Interval: add interval parsing support Class interval holds intervals (chr, start, stop) and can read and write all the following interval types: BED, GATK and PICARD. Functionality includes: * Creating and manipulating Interval objects * Readin... push MauricioCarneiro travis-ci pending completion   set done
773 master Interval: add interval parsing support Class interval holds intervals (chr, start, stop) and can read and write all the following interval types: BED, GATK and PICARD. Functionality includes: * Creating and manipulating Interval objects * Readin... Pull #200 MauricioCarneiro travis-ci pending completion   set done