rcavalcante / annotatr / 39

Builds Branch Commit Type Ran Committer Via Coverage
39 master Merge branch 'master' of https://github.com/rcavalcante/annotatr push rcavalcante travis-ci pending completion   set done
38 master Changes via dplyr updates * Recent dplyr versions changed the way columns resulting from calls to summarize_*() are named. Whereas they were 'n', 'mean', etc, they are now prefixed with the name of the column over which the quantity results, i.e.... push rcavalcante travis-ci pending completion   set done
37 master Add parameters for legend labels in plot_numericals * Instead of automatically generating legend labels based on the variable used for the facet and the data source, allow the user to give the label to make it more publication ready. push rcavalcante travis-ci pending completion   set done
36 master Forgot to stage DESCRIPTION * ugh. push rcavalcante travis-ci pending completion   set done
35 master Remove enhancers from vignette * Liable to cause build problems sporadically because of downtime. push rcavalcante travis-ci pending completion   set done
34 master Document new annotations data * Also include creation script in data-raw/ push rcavalcante travis-ci pending completion   set done
31 master Add data.frame coercion of annotated regions to vignette * Added example code to the vignette showing people how to coerce the result of annotate_regions() to a data.frame, and then to subset based on a gene symbol. push rcavalcante travis-ci pending completion   set done
30 master Remove meta/ folder * Was git ignored, but remnants remained. push rcavalcante travis-ci pending completion   set done
29 v1.1.12 Update documentation * Remove general code blocks at the beginning of summarization and visualization sections. push rcavalcante travis-ci pending completion   set done
28 master Update documentation * Remove general code blocks at the beginning of summarization and visualization sections. push rcavalcante travis-ci pending completion   set done
27 v1.1.11 Merge pull request #1 from rcavalcante/v1.1.11-beta * Add a function to build annotations from AnnotationHub resources. * Change supported_annotations() and supported_genomes() into builtin_annotations() and builtin_genomes(). This enables more ... push web-flow travis-ci pending completion   set done
23 master Merge pull request #1 from rcavalcante/v1.1.11-beta * Add a function to build annotations from AnnotationHub resources. * Change supported_annotations() and supported_genomes() into builtin_annotations() and builtin_genomes(). This enables more ... push web-flow travis-ci pending completion   set done
22 master Bugfix: Fix reference to column in lncRNA annotations * Somehow referred to column as transcript instead of transcript_type. * Even though the referenced column didn't exist, the R "feature" of incomplete referencing let hte bug slip through. Gr... Pull #1 web-flow travis-ci pending completion   set done
21 v1.1.11-beta Bugfix: Fix reference to column in lncRNA annotations * Somehow referred to column as transcript instead of transcript_type. * Even though the referenced column didn't exist, the R "feature" of incomplete referencing let hte bug slip through. Gr... push rcavalcante travis-ci pending completion   set done
19 master Documentation updates to some internal functions * Specifically those functions related to HMM annotations. Want to avoid any WARNINGs in the builds. From: Raymond Cavalcante <cavalcante.raymond@gmail.com> git-svn-id: https://hedgehog.fhcrc.org... push r.cavalcante travis-ci pending completion   set done