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Ran 09 Nov 2015 07:28PM UTC

Files 23

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Committed 09 Nov 2015 07:13PM UTC coverage: 94.074% (+0.003%) from 94.071%

Job # 593.1

Build Type

push

travis-ci

Committed by

yifei-men

Commit Message

YAML based unit test for gvcf based examples

Unit case for full suite of GLnexus services (discovery, unification and genotyping) with a single YAML file input. YAML file contains: input gvcf(s); "truth" unified sites and "truth" vcf output.

Currently, the test cases do not assert on accuracy of GLnexus generated unified sites and genotyped vcf output, but only prints the output (including any differences) to stdout.

Full commit history is found in PR #41

Coverage Stats

1794 of 1907 relevant lines covered (94.07%)

3922.86 hits per line

dnanexus-rnd / GLnexus / 593 / 1
93%
master: 93%

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dnanexus-rnd / GLnexus / 593 / 1 93% master: 93%

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Markdown

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RDoc

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dnanexus-rnd / GLnexus / 593 / 1
93%
master: 93%

README BADGES
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