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master: 81%

Ran 02 Jul 2020 08:04PM UTC

Files 12

Run time 18s

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Committed 21 Jun 2020 05:42PM UTC coverage: 70.338%. First build

Job # MPLBACKEND=Agg

Build Type

push

travis-ci-com

Committed by

web-flow

Commit Message

Phenotype Spatial Analysis (#97)

* preliminary code and new closenum function

* new code and test functions

* code cleanup and comments

* Update requirements.txt

* Dostring added

* docstrings added

* New edits

* Comment cleanup

* New closenum and indexing

* new closenum and column name indexing

* New closenum and variable names

* some edits

* preliminary analysis script

* Added point7 and H5py

* h5py changes

* h5py adjustments in seg_utils

* multiple fovs and distmat point fix

* new edits

* example data

* file paths

* file close

* dictionaries

* dict

* threshold check

* new changes

* Update requirements.txt

* Update requirements.txt

* file path and xarray input

* pep

* new notebook?

* notebook edits

* more new notebook edits

* dropped bootstrap num

* even lower bootstrap num

* viz fix

* no example.py

Co-authored-by: ngreenwald <noahfgreenwald@gmail.com>

Run Details

562 of 799 relevant lines covered (70.34%)

0.7 hits per line

angelolab / segmentation / 424 / 1
70%
master: 81%

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angelolab / segmentation / 424 / 1 70% master: 81%

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Source Files on job 424.1 (MPLBACKEND=Agg)

angelolab / segmentation / 424 / 1
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master: 81%

README BADGES
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