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Ran 04 Jun 2020 06:49AM UTC

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Committed 04 Jun 2020 06:19AM UTC coverage: 54.912% (+0.1%) from 54.797%

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push

travis-ci

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tgbugs

Commit Message

work on neurondm simple, updates to combinators to support

using the *Legacy classes it is possible to parse the old python
exports and serialize to owl almost everything except for
LogicalPhenotypes, that is mostly an issue with figuring out the
correct approach for dealing with combinators for nested phenotype
collections and possibly also dealing with collection simplification
e.g. if you have an AndCell nested in an AndCell the nested AndCell
members should be merged up, but that shouldn't be done automatically,
it should be done explicitly

also improvements to OntGraph namespaces_manager= kwargs to accept any
type that BNM.populate_from supports, and change BNM.populate/_from to
return the graph being populated and the the namespace manager to
allow for chaning of commands

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