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Fix/command out err (#289)

* fixing saving of output for BuildTestCommand

Signed-off-by: vsoch <vsochat@stanford.edu>

* fixing issues with returncode for BuildTestCommand

Signed-off-by: vsoch <vsochat@stanford.edu>

* adding universal newlines parameter to buildtest command to account for universal newlines

Signed-off-by: vsoch <vsochat@stanford.edu>

* preparing to rebase to get read_file from buildtest.utils.file

Signed-off-by: vsoch <vsochat@stanford.edu>

* adding custom capture to get stderr and stdout

Signed-off-by: vsoch <vsochat@stanford.edu>

* Changing POpen to Popen (typo)

* Addressing nit for order of imports.

* black probably wants two newlines

152 of 271 branches covered (56.09%)

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576 of 849 relevant lines covered (67.84%)

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