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Ran 23 Jan 2020 08:34AM UTC

Files 41

Run time 4s

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Committed 23 Jan 2020 08:30AM UTC coverage: 89.199% (+0.02%) from 89.176%

Job # 233.1

Build Type

push

travis-ci

Committed by

web-flow

Commit Message

Remove hardcode specific to Clinical Genomics (#64)

* Remove hardcode specific to Clinical Genomics

User can now specify in the config file what data to be exported to
the vcf file from the database.

* Add tests

* Test mutacc demo in travis build

* Add meta data to be included when exporting vcf for demo case

* Fix

* Add python 3.7 in travis

* Fix travis.yml

* travis test

* Add python 3.7 to travis build again

* Last fix in travis.yml

* Pass 'export' and 'import' vcf parse information via CLI

* Fix bug

* Added docs and in changelog

* Add correct 'number' to ID header (. if ID is multivalue, else 1)

* Correct documentation

* Fix comments

* fix .travis.yml

* fix

* refactoring

Coverage Stats

1214 of 1361 relevant lines covered (89.2%)

0.89 hits per line

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