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Load options from config file (#84)

* Add ability to load run configuration from json file

* Add ability to load run configuration from json file

* Fix unreliable cli test working in cwd

* Refactor tests

* Tweak configuration loading

- renaming `--options-file` to `--config`

* Add missing config test

* Load configuration using joycon

- supporting both json (with comments) & js configuration
- extending cli configuration test suite

* Simplify config loading

* Update test suite

* Fix dependencies :package:

* Move comments around

* Override config with cli options

171 of 175 branches covered (97.71%)

Branch coverage included in aggregate %.

234 of 236 relevant lines covered (99.15%)

35.65 hits per line