• Home
  • Features
  • Pricing
  • Docs
  • Announcements
  • Sign In

vanvalenlab / deepcell-tracking / 71 / 1
90%
master: 90%

Build:
DEFAULT BRANCH: master
Ran 12 Nov 2019 08:09PM UTC
Files 3
Run time 0s
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst

12 Nov 2019 08:07PM UTC coverage: 68.072% (+4.8%) from 63.256%
71.1

push

travis-ci-com

web-flow
Refactor CellTracker with dynamic programming! (#12)

* Refactor class to camel case `CellTracker`.

* `create_track` no longer calls `get_features`, using cached `frame_features` via `get_frame_features` helper function instead.

* use coordinates='rc' to avoid a warning.

* Add resize utility and replace the resize calls in sub_area and get_features.

* add `get_frame`, `get_cells_in_frame`, `_build_cost_matrix`, and `get_input_pairs` as  helper functions.

* update `clean_up_annotations` with helper functions and fix uuid bug

* call `get_features` on specific frame and label (no lists) and remove `X` and `y` from function arguments.

* change `_track_cells` to `track_cells` as it is the main entrypoint.

* initialize track in init.  call `intialize_tracks` inside `track_cells`

* convert self.feature_shape from a dict to a function call with `get_feature_shape`

* `track_frame_features` is not the correct shape, index into first frame.

* refactor `_compute_feature` to `compute_distance`, and compute norm distance on axis=0 simultaneously.

* cache feature future_area in `self.tracks`

* move capped track check to get_input_pairs and do all pair assignments at once.

* use the index of the frame to update new tracks and parent tracks.

* when adding track data to an existing track, fetch it from frame_features instead of calling get_features

* update tests for fetch_track_feature, remove `absl` as a dependency.

452 of 664 relevant lines covered (68.07%)

0.68 hits per line

Source Files on job 71.1
  • Tree
  • List 0
  • Changed 3
  • Source Changed 3
  • Coverage Changed 3
Coverage ∆ File Lines Relevant Covered Missed Hits/Line
  • Back to Build 15
  • Travis Job 71.1
  • 57ce94f2 on github
  • Prev Job for on master (#58.1)
  • Next Job for on master (#83.1)
STATUS · Troubleshooting · Open an Issue · Sales · Support · CAREERS · ENTERPRISE · START FREE · SCHEDULE DEMO
ANNOUNCEMENTS · TWITTER · TOS & SLA · Supported CI Services · What's a CI service? · Automated Testing

© 2026 Coveralls, Inc