98: 63%

Ran 15 Oct 2019 11:04AM UTC

Files 166

Run time 12s

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Committed 15 Oct 2019 10:51AM UTC coverage: 63.148% (+0.4%) from 62.765%

Job # COVERALLS=true

Build Type

push

travis-ci

Committed by

muffato

Commit Message

Merge branch 'release/99'

* release/99: (79 commits)
  bugfix: successful linked tickets returns empty string
  bugfix: added timestamp to JIRA HC subtasks
  updated vertebrates registry config file
  bugfix: when the nib file is missing, clear the parameter so that Production::Analysis::AlignmentChains doesn't think the nib is expected there
  HC sql query to check species and sequence number
  Don't limit the last attempt, give it all the time it needs
  bugfix: We call them breeds, now
  bugfix: this needs a lot more than 250 Mb
  Update Production::Analysis modules to accept new tmp_work_dir
  Update on configutration file and new updated species tree
  Fix for Pecan input clashes
  bugfix; this should be "unless" !
  I used the real e96 production databases as "_prev" to make sure I am not carrying errors from the e97 and e98 reindexing
  Updated the command lines for e99
  Insert dummy members so that we can always rely on foreign keys
  fixup! Since sequence of renames could go across different genomes, rename them all in the same job
  Updated all the resource classes
  bugfix: there are supertrees of supertrees too
  bugfix: update the gene_count of the parent tree too
  Simplified the rules about the clusterset_id in order to work for all collections
  ...

Run Details

12795 of 20262 relevant lines covered (63.15%)

774.62 hits per line

Ensembl / ensembl-compara / 5705 / 1
37%
release/98: 63%

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Source Files on job 5705.1 (COVERALLS=true)

Ensembl / ensembl-compara / 5705 / 1 37% release/98: 63%

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Source Files on job 5705.1 (COVERALLS=true)

Ensembl / ensembl-compara / 5705 / 1
37%
release/98: 63%

README BADGES
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