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Public-Health-Bioinformatics / LexMapr / 414 / 1
86%
master: 80%

Build:
Build:
LAST BUILD BRANCH: v0.7.0
DEFAULT BRANCH: master
Ran 02 Oct 2019 07:30PM UTC
Files 13
Run time 1s
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02 Oct 2019 07:17PM UTC coverage: 89.243% (-0.3%) from 89.55%
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More transparent matching (#76)

* Less randomness, better reporting and clean code

* Less randomness
  * Replaced usages of set to remove duplicates from lists with usages
    of ``OrderedDict.fromkeys`` method
    * Preserves original order of list
    * Did replace some lists with sets, when it did not have any
      effect on the order of anything important
      * For speed-up purposes

* Better reporting
  * Added chronological order to ``matched_components``
    * Report component matches in exact order they are made
  * Added chronological order to ``micro_status``
    * Report ``micro_status`` elements in exact order they are added
  * Report exact tokens treatment or match conditions apply to
    * e.g., 'Abbreviation-Acronym Treatment' is now
      'Abbreviation-Acronym Treatment: fluid'
    * e.g., 'A Direct Match' is now
      "{cerebrospinal fluid: ['A Direct Match']}"
  * All the above makes the matching process more transparent
  * Also sorted third-party final classifications

* Clean code
  * Removed unnecessary functions ``allPermutations`` and ``combi``
  * Updated stale comments

* Adjusted tests accordingly

* Removed some randomness from ``retainedPhrase``

* Usage of set to remove duplicates replaced with
  ``OrderedDict.fromkeys``

* Adjusted tests accordingly

979 of 1097 relevant lines covered (89.24%)

0.89 hits per line

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