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tests: set skip_if_unavailable in test repos

dnf seems to have changed the default for skip_if_unavailable. Some
mock repositories are still around in later tests, which then fail
because metadata cannot be synced.

Also expose skip_if_unavailable in dnf_repo_to_file_repo(), so that
tests checking for equality of repo files continue to pass.

1256 of 2153 branches covered (58.34%)

Branch coverage included in aggregate %.

3350 of 5365 relevant lines covered (62.44%)

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