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master: 99%

Ran 15 Nov 2018 05:12PM UTC

Files 24

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Committed 15 Nov 2018 04:26PM UTC coverage: 93.435%. Remained the same

Job # COVERALLS=true DB=mysql

Build Type

push

travis-ci

Committed by

james-monkeyshines

Commit Message

Much as I appreciated the baroque SQL query, it does make maintenace much harder. Since the API does all the grisly mapping between patches, we can rely on that, going through each alt_allele_group in turn and checking that all the genes/seq_regions of it's members are consistent. The SQL query also did not handle Y/PAR regions correctly; it's fine if there are patches on chrY, as long as they are not in the PAR region, but the datacheck was incorrectly reporting these as failures. I was going to suggest API methods to use as comments in the PR review, but by the time I'd worked out what to suggest, I'd basically re-written the datachecks...

Run Details

1409 of 1508 relevant lines covered (93.44%)

12.45 hits per line

Ensembl / ensembl-datacheck / 189 / 1
96%
master: 99%

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Source Files on job 189.1 (COVERALLS=true DB=mysql)

Ensembl / ensembl-datacheck / 189 / 1 96% master: 99%

README BADGES x

Markdown

Textile

RDoc

HTML

Rst

Source Files on job 189.1 (COVERALLS=true DB=mysql)

Ensembl / ensembl-datacheck / 189 / 1
96%
master: 99%

README BADGES
x