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Ran 15 Jan 2015 03:58AM UTC

Files 77

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Committed 15 Jan 2015 03:49AM UTC coverage: 64.8%. First build

Job # TERM=dumb

Build Type

push

travis-pro

Committed by

droazen

Commit Message

Engine support for read and reference traversals/queries, and initial ReadWalker interface

ReadWalker: initial walker interface with support for iteration over reads with optional reference
            contextual information

            PrintReadsWithReference is provided as an example ReadWalker

ReadsDataSource: full support for iteration and queries over multiple SAM/BAM files, optionally
                 bounded by intervals

ReferenceDataSource: support for targeted queries by interval (full iteration over the reference not
                     yet supported)

Comprehensive unit tests

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master: 81%

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