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fix seq_i, seq_j type (#179)

* fix seq_i, seq_j type

* update changelog and version

* update indel error to 0.02 and pr fixes

* update indel error to 0.02 and pr fixes

* update indel error to 0.02 and pr fixes

* update indel error to 0.02 and pr fixes

165 of 185 branches covered (89.19%)

458 of 514 relevant lines covered (89.11%)

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