broadinstitute / viral-ngs / 6650 / 6
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master: 23%

Ran 24 Aug 2018 03:36PM UTC

Files 41

Run time 6s

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Committed 24 Aug 2018 03:26PM UTC coverage: 32.248% (-0.04%) from 32.289%

Job # TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util --cov file_utils"

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push

travis-ci

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Commit Message

safely build snpEff database (#881)

only include a new database in the snpEff config if the DB build succeeded. This closes #873

Run Details

418 of 2653 branches covered (15.76%)

2050 of 6357 relevant lines covered (32.25%)

0.32 hits per line

Source Files on job 6650.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util --cov file_utils")