jason-neal / eniric / 698 / 1
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coverage: 72.674% (+11.2%) from 61.474%
698.1

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Update Atmosphere handing (#82)

* start new atmosphere class wih some basic tests

* Remove old barycenter shift code

* Add consecutive test to class as well to keep it alive. Setting it False on default though.

* Add atmosphere tests.

* Fix split_atmmodel code and add documentation.

* Allow atmopsheric model to be configured in config file.

* Update split_atmmodel and add to installed scripts.

* Inlcude compressed and add Full TAPAS 2014 atmosphere model.

Unzip atmmodel in split_atmosphere.py if not present.

* Rename doppler_shift_atmopshere to bary_shift_atmosphere.py.

* Add atmos to Makefile

* Replace prepare_atmopshere function with Atmosphere class everywhere

* Roll back to Full atmosphere mask if needed

* Make Atmosphere indexable and copyable.

* Prepare atmopshere file in CI setup.

* Split atmosphere by wavelength limits

* Use atm model in split_atm

* Replace get_corresponding_atm() into Atmosphere.at()

* Add from_band method and test. 

* Fix masking transmission.

* Upate check for ALL and get all bands from eniric.bands.

* Adjust broadening input params.

* Use make again. Enable ALL band choice

* Remove None as valid band choice, use ALL.
Fix choices.extend(eniric.bands[all]) for script choices.

* Xfail boadening tests.

* Reduce number of test files built.

* Update documetaion of Atmosphere class.

* Notebook example of Atmosphere.

625 of 860 relevant lines covered (72.67%)

0.73 hits per line

Source Files on job 698.1