biocore / scikit-bio / 3638 / 1

0%

master: 0%

push

travis-ci

Biplot scores (#1557)

* fix column names mismatch in biplot_scores

* Create varechem.csv

* Create varespec.csv

* Update _redundancy_analysis.py

* Add files via upload

* test comparing to results from vegan

* typo in test rda

* names index and columns of outputs are assigned individually, replacing pc_ids

* Correct variable names to match up with the variables in setUp

* remove the ID column in varespec and varechem to test rda

* vegan outputs eigenvalues whereas skbio outputs singular values

* FIX: fixing error message when running pdist within beta diversity

* add self

* TST: Fixing test to make skbio comparable to vegan

* STY: flake8

* BLD: Fixing permissions

3980 of 4087 branches covered (97.38%)

9402 of 9472 relevant lines covered (99.26%)

0.99 hits per line