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Ran 10 Apr 2018 01:52PM UTC

Files 177

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Committed 10 Apr 2018 01:15PM UTC coverage: 69.613% (+0.003%) from 69.61%

Job # 1317.4

Build Type

push

travis-ci

Committed by

jdhughes-usgs

Commit Message

Resolve several numpy warnings (#317)

* Avoid numpy warning from issubdtype

For reference, this warning was:
FutureWarning: Conversion of the second argument of issubdtype from `int` to `np.signedinteger` is deprecated. In future, it will be treated as `np.int32 == np.dtype(int).type`.

* Improve float type check method

* Avoid RuntimeWarning: invalid value encountered in double_scalars

* Transition some numpy recarrays to structured arrays to avaoid FutureWarning

This warning was:
> Numpy has detected that you may be viewing or writing to an array returned by selecting multiple fields in a structured array.
> This code may break in numpy 1.15 because this will return a view instead of a copy -- see release notes for details.

Also remove a few too unecessary .copy() calls.

* fix check that was using 1.0 rather than chk.thin_cell_threshold

use masked array for thicknesses with non-finite values to avoid
a series of numpy warnings:
RuntimeWarning: invalid value encountered in less/less_equal/greater

* internally use maksed arrays to avoid issues calculating with invalid values (NaNs), but return arrays with invalid values, as is expected(!?)

* repair my bad indexing, and fix a few more unresolved FutureWarning

Coverage Stats

25261 of 36288 relevant lines covered (69.61%)

0.7 hits per line

modflowpy / flopy / 1317 / 4
73%
develop: 73%

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