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#1577 Add "--exclude" Option (#3210)

* Add --exclude as option.

* Add tests for --exclude option.

* Implement --exclude.

* Update --exclude description.

* Remove old exclude fixture.

* Add new exclude fixture.

* Fix tests for --exclude option.

* Add name to package.contributors.

* Filter new files before they're added.

* Allow multiple --exclude flags rather than using a comma-delimited list.

* Use .fixture extension for exclude fixtures.

* Use runMochaJSON (run) instead of of directInvoke.

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