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Remove clean() from top-level api

CLoses #3

Squashed commit of the following:

commit 6cc37805f
Author: Mike Fogel <mike@fogel.ca>
Date:   Thu Mar 1 19:18:36 2018 -0300

    Remove clean(), implementation and tests updates

    One of the updated tests fails now, seems to have uncovered a bug. Will
    investigate.

commit fca21c953
Author: Mike Fogel <mike@fogel.ca>
Date:   Thu Mar 1 19:02:31 2018 -0300

    README updates

278 of 283 branches covered (98.23%)

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