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Ran 15 Nov 2014 12:03AM UTC

Files 191

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Committed 14 Nov 2014 11:55PM UTC coverage: 94.782% (-0.5%) from 95.293%

Job # 1435.2

Build Type

push

travis-ci

Committed by Karthik Gururaj

Commit Message

1. Moved MergedVCFLUTBase<> inside utils namespace
2. Return "" if bcf_hdr_int2id() returns nullptr in get_field_name(),
get_sample_name() in VariantHeader
3. Better comments for MergedVCFLUTBase and VariantHeaderMerger
4. Removed custom missing() functions - use gamgee::missing() only
5. Merged VCF header resides inside VariantHeaderMerger. It is
constructed using add_header(), add_headers()
functions. A const reference can be obtained by using
get_merged_header().
6. All get_*_lut() functions are now const
7. Use default destructor
8. Check to ensure all test paths for test cases for VariantHeaderMerger
(see variant_header_merger_test_path_counters)

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2888 of 3047 relevant lines covered (94.78%)

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