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broadinstitute / viral-ngs / 5366 / 5
23%
master: 23%

Build:
DEFAULT BRANCH: master
Ran 23 Jan 2018 11:32PM UTC
Files 45
Run time 41min
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23 Jan 2018 11:16PM UTC coverage: 70.941% (+0.07%) from 70.874%
TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]

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order_and_orient: if some contigs align ambiguously, warn but still process the rest (#760)

order_and_orient: if some contigs align ambiguously, warn but still process the rest

6069 of 8555 relevant lines covered (70.94%)

0.71 hits per line

Source Files on job 5366.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure])
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