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Build packaging on every branch commit (#702)

* move easy-deploy script and Dockerfile to this repo for per-commit testing of packaging

* render script passes PACKAGE_NAME to template

* suffix correction

* "set -e -x -o pipefail" in build script

* strcmp change

* template render source change

* remove "-x" from set to decrease verbosity of build script

* version adjustment

* build package on commits not just PRs

* download by commit rather than branch name for non-tagged package builds

* only install conda packages for tools if PERFORM_TESTING==true

* add ANACONDA_TOKEN to non-tag conda build for upload to anaconda.org

* get version from git describe --tags --always --dirty

git checkout may need to be deeper…

* newer gosu

* increase git checkout depth, move google cloud sdk from manual install to APT install, remove --dirty from git describe

* sligth cleanups

* oops, remove sudo

* fix run-in to next line

* remove deprecated use of empty continuation lines

* a few fixes and tweaks

* more bug fixes and version tag tweaks

* more tweaks to version name

* more version number tweaks

* fix version tag

* make easy deploy script more tolerant of viral-ngs-dev vs viral-ngs package name

* modify docker build scripts to pull from anaconda instead of using local tarball

* there are two easy-deploy scripts for some reason, update the old one to the new code

* move comments out of gosu script, dont call coveralls if we dont have it installed

* tag docker image properly and add docker push

* clean docker tag to a format docker likes

* switch docker login to use --password-stdin

* bump the docker login earlier in the script

* revert to older style docker login

* upgrade docker version

* fix DOCKER_USER secure env variable (was DOCKER_EMAIL twice)

* move docker login to Travis before_install

* move secure tokens to only one part of the build matrix, remake the DOCKER_USER secure env

* bugfix version string

* remove some && bash operators that cause silently swallowed failures and instead let set -e -o pipefail do its thing

* increase git depth for the sake of long branches that havent merged yet

* slight re-org of travis related scripts, functionally equivalent

* bugfixes

* cache less stuff

* fix

* change docker tag for PR images

5484 of 8157 relevant lines covered (67.23%)

0.67 hits per line

Source Files on job 4760.2 (PERFORM_TESTING=true)