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Committed by Timothy Click

Commit Message

Combined charmm36_nma and charmm_nma.
Added ability to split all-atom trajectory via CHARMM or Gromacs.
Changed default output directory for fluctmatch operations.
Changed version recognition for parameter output because c35 can use FLEX parameters.
Fixed an issue in the create_empty_parameters function.

Signed-off-by: Timothy Click <tcthepoet@yahoo.com>

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