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biocore / gneiss / 577 / 1
97%
master: 97%

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DEFAULT BRANCH: master
Ran 16 May 2017 01:00AM UTC
Files 19
Run time 7s
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16 May 2017 12:51AM UTC coverage: 98.785% (+0.04%) from 98.742%
PYVERSION=3.5 USE_CYTHON=TRUE MAKE_DOC=TRUE

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antgonza
WIP: Major refactor of regression object (#174)

* WIP: Major refactor of regression object

* TST: Fixing all tests in regression/_model.py

* FIX: Fixing metadata mutability

* TST: Fixing remaining metadata nan test

* TST: Adding working test for kfold cv.  New refactor seems to have improved loo -- so that test has been modified

* FIX: Correcting remaining ols tests

* ENH: Knocking out tree parameter

* TST: Refactor linear mixed effects model

* ENH: Cleaning up summary in ols to include cross validation results
Removing summary information in lme, since we don't have good model
statistics atm.

* FIX: Removing lovo in mixedlm, since we can't do it

* Refactored summary cli methods

* ENH: Adding in new summary methods.
Also ditching q2 related files

* FIX: removing other instances of type

* FIX: Incorporating types from q2

* ENH: Fixing sizing of projection plots

Also refactored deposit results html

* STY: Flake8

* FIX: Refactoring model tests

Also incorporating ilr changes from #182 to fix unittests

* TST: Adding new q2 test for ols-regression api

* TST: Fixing tests in linear mixed effects model

* flake8 fixes

* PEP8

* TST: Adding missing files

* STY: Removing useless code

* flake8

* ENH: Addressing @antgonza comments

* pep8

* DOC: Fixing optional docs

1057 of 1070 relevant lines covered (98.79%)

0.99 hits per line

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