Ran
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Files
18
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Run time
0s
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README BADGES
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jenkins
67 of 226 relevant lines covered (29.65%)
0.3 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | src/main/scala/org/bdgenomics/cannoli/Bwa.scala | 155 + 154 | 13 + 13 | 0 | 13 + 13 | 0.0 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/Bowtie.scala | 87 + 81 | 7 + 4 | 0 - 2 | 7 + 6 | 0.0 - 1.0 | |
0.0 | ...org/bdgenomics/cannoli/util/QuerynameGrouper.scala | 37 + 21 | 4 - 6 | 0 | 4 - 6 | 0.0 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/SnpEff.scala | 109 - 68 | 13 - 49 | 0 - 14 | 13 - 35 | 0.0 - 1.0 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/Bwa.scala | 155 + 154 | 28 + 28 | 0 | 28 + 28 | 0.0 | |
0.0 | ...rc/main/scala/org/bdgenomics/cannoli/Bowtie2.scala | 87 + 73 | 7 | 0 - 7 | 7 + 7 | 0.0 - 1.0 | |
0.0 | ...c/main/scala/org/bdgenomics/cannoli/Bedtools.scala | 123 - 65 | 11 - 48 | 0 - 43 | 11 - 5 | 0.0 - 1.0 | |
0.0 | ...rc/main/scala/org/bdgenomics/cannoli/Bowtie2.scala | 87 + 73 | 11 + 4 | 0 - 7 | 11 + 11 | 0.0 - 1.0 | |
0.0 | .../main/scala/org/bdgenomics/cannoli/Freebayes.scala | 109 + 99 | 10 + 5 | 0 - 3 | 10 + 8 | 0.0 - 1.0 | |
0.0 | .../main/scala/org/bdgenomics/cannoli/Freebayes.scala | 109 + 99 | 13 + 8 | 0 - 3 | 13 + 11 | 0.0 - 1.0 |