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Run time
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README BADGES
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jenkins
854 of 1016 relevant lines covered (84.06%)
0.84 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | .../org/bdgenomics/avocado/cli/DiscoverVariants.scala | 65 + 29 | 2 - 14 | 0 - 13 | 2 - 1 | 0.0 - 1.0 | |
0.0 | ...rg/bdgenomics/avocado/cli/BiallelicGenotyper.scala | 245 + 105 | 36 - 32 | 0 - 38 | 36 + 6 | 0.0 - 17 | |
0.0 | .../org/bdgenomics/avocado/cli/DiscoverVariants.scala | 65 + 29 | 6 - 10 | 0 - 13 | 6 + 3 | 0.0 - 1.0 | |
0.0 | ...rg/bdgenomics/avocado/cli/BiallelicGenotyper.scala | 245 + 105 | 25 - 43 | 0 - 38 | 25 - 5 | 0.0 - 17 | |
0.0 | ...avocado/serialization/AvocadoKryoRegistrator.scala | 40 - 3 | 5 - 20 | 0 - 22 | 5 + 2 | 0.0 - 1.0 | |
0.0 | ...scala/org/bdgenomics/avocado/cli/AvocadoMain.scala | 78 + 58 | 23 + 14 | 0 - 9 | 23 + 23 | 0.0 - 1.0 | |
0.0 | ...a/org/bdgenomics/avocado/util/TreeRegionJoin.scala | 205 + 92 | 12 - 43 | 0 - 52 | 12 + 9 | 0.0 - 5 | |
66.67 | .../scala/org/bdgenomics/avocado/cli/Reassemble.scala | 88 + 64 | 9 - 4 | 6 - 3 | 3 - 1 | 1.0 | |
78.79 | ...a/org/bdgenomics/avocado/realigner/Realigner.scala | 178 + 158 | 33 + 25 | 26 + 18 | 7 + 7 | 1.0 - 38 | |
83.05 | ...la/org/bdgenomics/avocado/models/Observation.scala | 159 + 141 | 59 + 48 | 49 + 38 | 10 + 10 | 1.0 - 11 |