Ran
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Files
18
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Run time
1s
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README BADGES
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jenkins
67 of 226 relevant lines covered (29.65%)
0.3 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | .../main/scala/org/bdgenomics/cannoli/Freebayes.scala | 109 + 83 | 13 - 1 | 0 - 14 | 13 + 13 | 0.0 - 382 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/Bowtie.scala | 87 + 38 | 7 + 1 | 0 | 7 + 1 | 0.0 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/Bwa.scala | 155 + 88 | 13 + 1 | 0 - 6 | 13 + 7 | 0.0 - 1.0 | |
0.0 | ...org/bdgenomics/cannoli/util/QuerynameGrouper.scala | 37 - 45 | 4 - 14 | 0 | 4 - 14 | 0.0 | |
0.0 | ...rc/main/scala/org/bdgenomics/cannoli/Cannoli.scala | 38 - 60 | 3 - 25 | 0 - 19 | 3 - 6 | 0.0 - 1.0 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/Bowtie.scala | 87 + 38 | 11 + 5 | 0 | 11 + 5 | 0.0 | |
0.0 | ...c/main/scala/org/bdgenomics/cannoli/Bedtools.scala | 123 + 98 | 11 - 3 | 0 - 14 | 11 + 11 | 0.0 - 301 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/SnpEff.scala | 109 - 18 | 10 - 27 | 0 - 34 | 10 + 7 | 0.0 - 1.0 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/Bwa.scala | 155 + 88 | 28 + 16 | 0 - 6 | 28 + 22 | 0.0 - 1.0 | |
0.0 | src/main/scala/org/bdgenomics/cannoli/SnpEff.scala | 109 - 18 | 13 - 24 | 0 - 34 | 13 + 10 | 0.0 - 1.0 |