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Files
246
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Run time
11s
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README BADGES
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jenkins
4918 of 6034 relevant lines covered (81.5%)
0.82 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | ...scala/org/bdgenomics/adam/cli/CountReadKmers.scala | 84 + 65 | 5 - 5 | 0 - 10 | 5 + 5 | 0.0 - 18 | |
0.0 | ...main/scala/org/bdgenomics/adam/cli/PrintADAM.scala | 107 + 43 | 2 - 31 | 0 - 4 | 2 - 27 | 0.0 - 1.0 | |
0.0 | .../main/scala/org/bdgenomics/adam/cli/Vcf2ADAM.scala | 83 + 68 | 5 - 2 | 0 - 6 | 5 + 4 | 0.0 - 1.0 | |
0.0 | .../main/scala/org/bdgenomics/adam/cli/FlagStat.scala | 140 + 91 | 3 - 22 | 0 - 22 | 3 | 0.0 - 1.0 | |
0.0 | ...scala/org/bdgenomics/adam/rdd/read/MDTagging.scala | 107 + 53 | 1 - 40 | 0 - 41 | 1 + 1 | 0.0 - 1.0 | |
0.0 | ...onsensus/ConsensusGeneratorFromSmithWaterman.scala | 92 + 82 | 15 + 10 | 0 - 5 | 15 + 15 | 0.0 - 17 | |
0.0 | ...dgenomics/adam/rdd/variant/VariantContextRDD.scala | 238 + 204 | 2 - 17 | 0 - 18 | 2 + 1 | 0.0 - 1.0 | |
0.0 | ...ain/scala/org/bdgenomics/adam/cli/ADAM2Fastq.scala | 95 - 623 | 8 - 387 | 0 - 90 | 8 - 297 | 0.0 - 1.0 | |
0.0 | ...ala/org/bdgenomics/adam/cli/CountContigKmers.scala | 74 - 33 | 4 - 47 | 0 - 11 | 4 - 36 | 0.0 - 1.0 | |
0.0 | ...bdgenomics/adam/models/NonoverlappingRegions.scala | 269 + 266 | 11 + 10 | 0 - 1 | 11 + 11 | 0.0 - 1.0 |