Ran
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Files
246
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Run time
10s
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<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/25a0a3fec82893638593d8d849a6cee0d6a99086">25a0a3fec<a href="https://github.com/bigdatagenomics/adam/commit/25a0a3fec82893638593d8d849a6cee0d6a99086">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/9abb159416c57e7ff2e1b73b81240097e440650b">9abb15941</a>">9abb15941</a><a href="https://github.com/bigdatagenomics/adam/commit/25a0a3fec82893638593d8d849a6cee0d6a99086"> into 98d2c923e">98d2c923e</a>
4917 of 6033 relevant lines covered (81.5%)
0.82 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | .../adam/rdd/contig/NucleotideContigFragmentRDD.scala | 304 + 298 | 2 - 3 | 0 - 5 | 2 + 2 | 0.0 - 1.0 | |
0.0 | ...rg/bdgenomics/adam/rdd/feature/FeatureParser.scala | 395 + 384 | 5 - 2 | 0 - 6 | 5 + 4 | 0.0 - 4 | |
0.0 | .../org/bdgenomics/adam/rdd/feature/CoverageRDD.scala | 259 + 203 | 2 - 23 | 0 - 18 | 2 - 5 | 0.0 - 3 | |
0.0 | ...dgenomics/adam/rdd/variant/VariantContextRDD.scala | 238 + 227 | 2 - 3 | 0 - 5 | 2 + 2 | 0.0 - 1.0 | |
0.0 | .../bdgenomics/adam/util/ParquetFileTraversable.scala | 86 - 219 | 23 - 114 | 0 - 128 | 23 + 14 | 0.0 - 26 | |
0.0 | ...scala/org/bdgenomics/adam/rdd/read/MDTagging.scala | 107 + 76 | 1 - 14 | 0 - 7 | 1 - 7 | 0.0 - 1.0 | |
0.0 | ...rg/bdgenomics/adam/rdd/read/SingleReadBucket.scala | 183 + 138 | 4 - 18 | 0 - 13 | 4 - 5 | 0.0 - 1.0 | |
0.0 | ...scala/org/bdgenomics/adam/util/ParquetLogger.scala | 35 - 9 | 2 - 21 | 0 - 9 | 2 - 12 | 0.0 - 1.0 | |
0.0 | ...in/scala/org/bdgenomics/adam/util/TwoBitFile.scala | 234 + 220 | 6 - 1 | 0 - 7 | 6 + 6 | 0.0 - 160 | |
0.0 | ...org/bdgenomics/adam/rdd/ReferencePartitioner.scala | 58 + 55 | 7 + 6 | 0 - 1 | 7 + 7 | 0.0 - 1.0 |