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Ran 04 Apr 2017 07:09PM UTC

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Committed 04 Apr 2017 06:38PM UTC coverage: 70.182% (+0.06%) from 70.124%

Job # 519.1

Build Type

push

travis-ci

Committed by

jmuhlich

Commit Message

Much faster expression evaluation by pulling lambdify out of loop (#248)

* Much faster expression evaluation by pulling lambdify out of loop

sympy.lambdify is relatively slow, and was unnecessarily being evaluated for
every simulation during SimulationResult construction. I've refactored the
SimulationResult constructor so that each expression is only lamdbified
once, which greatly increases speed. On my laptop running 25 simulations
with a 202 expression model, the simulations went from >12 minutes to
<12 seconds.

* Fix sphinx documentation build for pysb.integrate and pysb.simulator

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