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Run time
2min
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README BADGES
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jenkins
804 of 959 relevant lines covered (83.84%)
0.84 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | ...avocado/serialization/AvocadoKryoRegistrator.scala | 40 + 9 | 5 - 2 | 0 - 7 | 5 + 5 | 0.0 - 11 | |
0.0 | .../org/bdgenomics/avocado/cli/DiscoverVariants.scala | 65 + 47 | 2 - 7 | 0 - 8 | 2 + 1 | 0.0 - 5507 | |
0.0 | ...rg/bdgenomics/avocado/cli/BiallelicGenotyper.scala | 221 + 214 | 30 + 27 | 0 - 3 | 30 + 30 | 0.0 - 1.0 | |
0.0 | ...scala/org/bdgenomics/avocado/cli/AvocadoMain.scala | 78 + 73 | 23 + 20 | 0 - 3 | 23 + 23 | 0.0 - 1.0 | |
0.0 | .../org/bdgenomics/avocado/cli/DiscoverVariants.scala | 65 + 47 | 6 - 3 | 0 - 8 | 6 + 5 | 0.0 - 5507 | |
0.0 | ...rg/bdgenomics/avocado/cli/BiallelicGenotyper.scala | 221 + 214 | 25 + 22 | 0 - 3 | 25 + 25 | 0.0 - 1.0 | |
0.0 | ...a/org/bdgenomics/avocado/util/TreeRegionJoin.scala | 205 + 192 | 12 + 5 | 0 - 5 | 12 + 10 | 0.0 - 1.0 | |
66.67 | .../scala/org/bdgenomics/avocado/cli/Reassemble.scala | 88 - 67 | 9 - 57 | 6 - 16 | 3 - 41 | 1.0 | |
75.76 | ...a/org/bdgenomics/avocado/realigner/Realigner.scala | 178 + 130 | 33 + 8 | 25 + 7 | 8 + 1 | 1.0 - 1.0 | |
83.05 | ...la/org/bdgenomics/avocado/models/Observation.scala | 159 + 78 | 59 + 24 | 49 + 14 | 10 + 10 | 1.0 - 89 |