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Files
243
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Run time
11s
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README BADGES
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jenkins
4394 of 5748 relevant lines covered (76.44%)
0.76 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | .../read/recalibration/BaseQualityRecalibration.scala | 132 + 108 | 40 + 36 | 0 - 4 | 40 + 40 | 0.0 - 14 | |
0.0 | .../org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala | 179 + 155 | 1 - 3 | 0 - 4 | 1 + 1 | 0.0 - 52 | |
0.0 | ...adam/rdd/read/recalibration/ObservationTable.scala | 156 + 139 | 10 + 1 | 0 - 9 | 10 + 10 | 0.0 - 1.0 | |
0.0 | ...a/org/bdgenomics/adam/rdd/variant/VariantRDD.scala | 151 + 114 | 1 - 14 | 0 - 13 | 1 - 1 | 0.0 - 384 | |
0.0 | .../bdgenomics/adam/util/ParquetFileTraversable.scala | 86 + 14 | 23 + 1 | 0 - 22 | 23 + 23 | 0.0 - 69 | |
0.0 | ...in/scala/org/bdgenomics/adam/util/TwoBitFile.scala | 234 + 106 | 6 - 76 | 0 - 64 | 6 - 12 | 0.0 - 2 | |
0.0 | ...scala/org/bdgenomics/adam/util/ParquetLogger.scala | 35 + 8 | 2 - 12 | 0 - 14 | 2 + 2 | 0.0 - 1.0 | |
0.0 | ...nomics/adam/rdd/read/recalibration/Covariate.scala | 140 + 116 | 14 + 10 | 0 - 4 | 14 + 14 | 0.0 - 16 | |
0.0 | ...dgenomics/adam/rdd/variant/VariantContextRDD.scala | 234 + 196 | 1 - 5 | 0 - 6 | 1 + 1 | 0.0 - 26 | |
0.0 | ...s/adam/rdd/read/recalibration/DinucCovariate.scala | 77 + 53 | 22 + 18 | 0 - 4 | 22 + 22 | 0.0 - 11 |