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Files
235
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Run time
11s
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README BADGES
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jenkins
4334 of 5677 relevant lines covered (76.34%)
0.76 hits per line
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|---|---|---|---|---|---|---|
0.0 | ...bdgenomics/adam/models/NonoverlappingRegions.scala | 269 + 258 | 11 + 6 | 0 - 4 | 11 + 10 | 0.0 - 1.0 | |
0.0 | ...a/org/bdgenomics/adam/models/ReferenceRegion.scala | 540 + 455 | 4 - 35 | 0 - 19 | 4 - 16 | 0.0 - 3 | |
0.0 | ...ain/scala/org/bdgenomics/adam/cli/ADAM2Fastq.scala | 95 + 86 | 8 + 2 | 0 - 3 | 8 + 5 | 0.0 - 1.0 | |
0.0 | .../main/scala/org/bdgenomics/adam/cli/ADAM2Vcf.scala | 101 + 93 | 6 + 2 | 0 - 3 | 6 + 5 | 0.0 - 1.0 | |
0.0 | ...main/scala/org/bdgenomics/adam/cli/PrintADAM.scala | 107 + 99 | 2 - 2 | 0 - 3 | 2 + 1 | 0.0 - 1.0 | |
0.0 | .../main/scala/org/bdgenomics/adam/cli/FlagStat.scala | 140 + 121 | 3 - 8 | 0 - 6 | 3 - 2 | 0.0 - 1.0 | |
0.0 | ...ala/org/bdgenomics/adam/cli/CountContigKmers.scala | 74 + 67 | 4 - 1 | 0 - 2 | 4 + 1 | 0.0 - 1.0 | |
0.0 | ...scala/org/bdgenomics/adam/cli/CountReadKmers.scala | 84 + 40 | 5 - 18 | 0 - 9 | 5 - 9 | 0.0 - 1.0 | |
0.0 | ...onsensus/ConsensusGeneratorFromSmithWaterman.scala | 92 + 59 | 15 | 0 - 8 | 15 + 8 | 0.0 - 1.0 | |
0.0 | ...rg/bdgenomics/adam/models/SequenceDictionary.scala | 460 + 442 | 4 - 2 | 0 - 5 | 4 + 3 | 0.0 - 1.0 |